Volume
Volume
Constructor Summary
| Public Constructor | ||
| public |
constructor(name: String, path: String, data: Float32array, nx: Integer, ny: Integer, nz: Integer, atomindex: Int32Array) Make Volume instance |
|
Member Summary
| Public Members | ||
| public |
|
|
| public |
|
|
| public |
|
|
| public |
|
|
| public |
|
|
| public |
|
|
| public get |
|
|
| public get |
|
|
| public get |
|
|
| public |
|
|
| public |
|
|
| public |
|
|
| public |
|
|
| public |
|
|
| public |
|
|
| public get |
|
|
| public get |
|
|
| public get |
|
|
| public get |
|
|
| public |
|
|
| public |
|
|
| Private Members | ||
| private |
|
|
| private |
|
|
| private |
|
|
| private |
|
|
| private |
|
|
| private |
|
|
| private |
|
|
Method Summary
| Public Methods | ||
| public |
clone() |
|
| public |
dispose() |
|
| public |
getBox() |
|
| public |
|
|
| public |
|
|
| public |
|
|
| public |
|
|
| public |
|
|
| public |
|
|
| public |
|
|
| public |
|
|
| public |
|
|
| public |
setAtomindex(atomindex: Int32Array): undefined set atom indices |
|
| public |
setData(data: Float32array, nx: Integer, ny: Integer, nz: Integer, atomindex: Int32Array): undefined set volume data |
|
| public |
set transformation matrix |
|
| public |
setStats(min: Number | undefined, max: Number | undefined, mean: Number | undefined, rms: Number | undefined) Set statistics, which can be different from the data in this volume, if this volume is a slice of a bigger volume |
|
| Private Methods | ||
| private |
_getBox() |
|
| private |
|
|
Public Constructors
public constructor(name: String, path: String, data: Float32array, nx: Integer, ny: Integer, nz: Integer, atomindex: Int32Array) source
Make Volume instance
Params:
| Name | Type | Attribute | Description |
| name | String | volume name |
|
| path | String | source path |
|
| data | Float32array | volume 3d grid |
|
| nx | Integer | x dimension of the 3d volume |
|
| ny | Integer | y dimension of the 3d volume |
|
| nz | Integer | z dimension of the 3d volume |
|
| atomindex | Int32Array | atom indices corresponding to the cells in the 3d grid |
Public Members
public atomindex source
public boundingBox source
public center source
public data source
public inverseMatrix source
public matrix source
public get max source
public get mean source
public get min source
public name source
public normalMatrix source
public nx source
public ny source
public nz source
public path source
public get position source
public get rms source
public get sum source
public get type source
public volsurf source
public workerPool source
Private Members
private __box source
private _max source
private _mean source
private _min source
private _position source
private _rms source
private _sum source
Public Methods
public clone() source
public dispose() source
public getBox() source
public getDataAtomindex() source
public getDataColor() source
public getDataPicking() source
public getDataPosition() source
public getDataSize() source
public getSigmaForValue() source
public getSurface() source
public getSurfaceWorker() source
public getValueForSigma() source
public setAtomindex(atomindex: Int32Array): undefined source
set atom indices
Params:
| Name | Type | Attribute | Description |
| atomindex | Int32Array | atom indices corresponding to the cells in the 3d grid |
public setData(data: Float32array, nx: Integer, ny: Integer, nz: Integer, atomindex: Int32Array): undefined source
set volume data
Params:
| Name | Type | Attribute | Description |
| data | Float32array | volume 3d grid |
|
| nx | Integer | x dimension of the 3d volume |
|
| ny | Integer | y dimension of the 3d volume |
|
| nz | Integer | z dimension of the 3d volume |
|
| atomindex | Int32Array | atom indices corresponding to the cells in the 3d grid |
public setMatrix(matrix: Matrix4): undefined source
set transformation matrix
Params:
| Name | Type | Attribute | Description |
| matrix | Matrix4 | 4x4 transformation matrix |
public setStats(min: Number | undefined, max: Number | undefined, mean: Number | undefined, rms: Number | undefined) source
Set statistics, which can be different from the data in this volume, if this volume is a slice of a bigger volume