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NGLView 2.1.0 documentation
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W
A
add() (nglview.shape.Shape method)
add_buffer() (nglview.shape.Shape method)
add_component() (nglview.NGLWidget method)
,
[1]
(nglview.widget.NGLWidget method)
add_pdbid() (nglview.NGLWidget method)
,
[1]
(nglview.widget.NGLWidget method)
add_representation() (nglview.NGLWidget method)
,
[1]
(nglview.widget.ComponentViewer method)
(nglview.widget.NGLWidget method)
add_structure() (nglview.NGLWidget method)
,
[1]
(nglview.widget.NGLWidget method)
add_trajectory() (nglview.NGLWidget method)
,
[1]
(nglview.widget.NGLWidget method)
ASEStructure (class in nglview)
(class in nglview.adaptor)
ASETrajectory (class in nglview)
(class in nglview.adaptor)
B
background (nglview.NGLWidget attribute)
,
[1]
(nglview.widget.NGLWidget attribute)
BiopythonStructure (class in nglview)
(class in nglview.adaptor)
C
camera (nglview.NGLWidget attribute)
,
[1]
(nglview.player.TrajectoryPlayer attribute)
(nglview.widget.NGLWidget attribute)
center() (nglview.NGLWidget method)
,
[1]
(nglview.widget.NGLWidget method)
center_view() (nglview.NGLWidget method)
,
[1]
(nglview.widget.NGLWidget method)
clean_empty_output_area() (in module nglview.utils.js_utils)
clean_error_output() (in module nglview.utils.js_utils)
clear() (nglview.NGLWidget method)
,
[1]
(nglview.widget.NGLWidget method)
clear_representations() (nglview.NGLWidget method)
,
[1]
(nglview.widget.NGLWidget method)
color_by() (nglview.NGLWidget method)
,
[1]
(nglview.widget.NGLWidget method)
ComponentViewer (class in nglview.widget)
count (nglview.NGLWidget attribute)
,
[1]
(nglview.player.TrajectoryPlayer attribute)
(nglview.widget.NGLWidget attribute)
D
delay (nglview.player.TrajectoryPlayer attribute)
demo() (in module nglview)
display() (nglview.NGLWidget method)
,
[1]
(nglview.widget.NGLWidget method)
download_image() (nglview.NGLWidget method)
,
[1]
(nglview.widget.NGLWidget method)
E
execute() (in module nglview.utils.js_utils)
F
FileStructure (class in nglview)
(class in nglview.adaptor)
frame (nglview.NGLWidget attribute)
,
[1]
(nglview.player.TrajectoryPlayer attribute)
(nglview.widget.NGLWidget attribute)
G
get_coordinates() (nglview.adaptor.ASETrajectory method)
(nglview.ASETrajectory method)
(nglview.HTMDTrajectory method)
(nglview.MDAnalysisTrajectory method)
(nglview.MDTrajTrajectory method)
(nglview.ParmEdTrajectory method)
(nglview.ProdyTrajectory method)
(nglview.PyTrajTrajectory method)
(nglview.SimpletrajTrajectory method)
(nglview.adaptor.HTMDTrajectory method)
(nglview.adaptor.MDAnalysisTrajectory method)
(nglview.adaptor.MDTrajTrajectory method)
(nglview.adaptor.ParmEdTrajectory method)
(nglview.adaptor.ProdyTrajectory method)
(nglview.adaptor.PyTrajTrajectory method)
(nglview.adaptor.SimpletrajTrajectory method)
get_port() (nglview.scripts.app.NGLViewApp method)
get_remote_port() (in module nglview.scripts.nglview)
get_structure_string() (nglview.adaptor.ASEStructure method)
(nglview.ASEStructure method)
(nglview.ASETrajectory method)
(nglview.BiopythonStructure method)
(nglview.FileStructure method)
(nglview.HTMDTrajectory method)
(nglview.IODataStructure method)
(nglview.IOTBXStructure method)
(nglview.MDAnalysisTrajectory method)
(nglview.MDTrajTrajectory method)
(nglview.OpenbabelStructure method)
(nglview.PdbIdStructure method)
(nglview.ProdyStructure method)
(nglview.PyTrajTrajectory method)
(nglview.QCelementalStructure method)
(nglview.RdkitStructure method)
(nglview.RosettaStructure method)
(nglview.SimpletrajTrajectory method)
(nglview.TextStructure method)
(nglview.adaptor.ASETrajectory method)
(nglview.adaptor.BiopythonStructure method)
(nglview.adaptor.FileStructure method)
(nglview.adaptor.HTMDTrajectory method)
(nglview.adaptor.IODataStructure method)
(nglview.adaptor.IOTBXStructure method)
(nglview.adaptor.MDAnalysisTrajectory method)
(nglview.adaptor.MDTrajTrajectory method)
(nglview.adaptor.OpenbabelStructure method)
(nglview.adaptor.PdbIdStructure method)
(nglview.adaptor.ProdyStructure method)
(nglview.adaptor.PyTrajTrajectory method)
(nglview.adaptor.QCelementalStructure method)
(nglview.adaptor.RdkitStructure method)
(nglview.adaptor.RosettaStructure method)
(nglview.adaptor.SimpletrajTrajectory method)
(nglview.adaptor.TextStructure method)
get_widget_by_name() (in module nglview.utils.widget_utils)
H
hide() (nglview.NGLWidget method)
,
[1]
(nglview.widget.ComponentViewer method)
(nglview.widget.NGLWidget method)
hide_toolbar() (in module nglview.utils.js_utils)
HTMDTrajectory (class in nglview)
(class in nglview.adaptor)
I
id (nglview.widget.ComponentViewer attribute)
init_funcs() (in module nglview.utils.js_utils)
interpolate (nglview.player.TrajectoryPlayer attribute)
interupt() (nglview.contrib.movie.MovieMaker method)
IODataStructure (class in nglview)
(class in nglview.adaptor)
IOTBXStructure (class in nglview)
(class in nglview.adaptor)
iparams (nglview.player.TrajectoryPlayer attribute)
L
launch_qtconsole() (in module nglview.utils.js_utils)
loaded (nglview.NGLWidget attribute)
,
[1]
(nglview.widget.NGLWidget attribute)
M
main() (in module nglview.scripts.nglview)
make() (nglview.contrib.movie.MovieMaker method)
make_form_item_layout() (in module nglview.layout)
MDAnalysisTrajectory (class in nglview)
(class in nglview.adaptor)
MDTrajTrajectory (class in nglview)
(class in nglview.adaptor)
MovieMaker (class in nglview.contrib.movie)
N
n_components (nglview.NGLWidget attribute)
,
[1]
(nglview.widget.NGLWidget attribute)
n_frames (nglview.adaptor.ASETrajectory attribute)
(nglview.ASETrajectory attribute)
(nglview.HTMDTrajectory attribute)
(nglview.MDAnalysisTrajectory attribute)
(nglview.MDTrajTrajectory attribute)
(nglview.ParmEdTrajectory attribute)
(nglview.ProdyTrajectory attribute)
(nglview.PyTrajTrajectory attribute)
(nglview.SimpletrajTrajectory attribute)
(nglview.adaptor.HTMDTrajectory attribute)
(nglview.adaptor.MDAnalysisTrajectory attribute)
(nglview.adaptor.MDTrajTrajectory attribute)
(nglview.adaptor.ParmEdTrajectory attribute)
(nglview.adaptor.ProdyTrajectory attribute)
(nglview.adaptor.PyTrajTrajectory attribute)
(nglview.adaptor.SimpletrajTrajectory attribute)
ngl_demo() (in module nglview.utils.js_utils)
nglview (module)
nglview.adaptor (module)
nglview.contrib.movie (module)
nglview.datafiles (module)
nglview.layout (module)
nglview.player (module)
nglview.scripts (module)
nglview.scripts.app (module)
nglview.scripts.cmd_example (module)
nglview.scripts.nglview (module)
nglview.shape (module)
nglview.static (module)
nglview.theme (module)
nglview.theme.theme (module)
nglview.utils.js_utils (module)
nglview.utils.widget_utils (module)
nglview.widget (module)
NGLViewApp (class in nglview.scripts.app)
NGLWidget (class in nglview)
,
[1]
(class in nglview.widget)
O
oceans16() (in module nglview.theme.theme)
on_camera_changed (nglview.player.TrajectoryPlayer attribute)
on_loaded (nglview.NGLWidget attribute)
,
[1]
(nglview.widget.NGLWidget attribute)
on_update_dragged_file (nglview.NGLWidget attribute)
,
[1]
(nglview.widget.NGLWidget attribute)
OpenbabelStructure (class in nglview)
(class in nglview.adaptor)
P
parameters (nglview.NGLWidget attribute)
,
[1]
(nglview.player.TrajectoryPlayer attribute)
(nglview.widget.NGLWidget attribute)
ParmEdTrajectory (class in nglview)
(class in nglview.adaptor)
PdbIdStructure (class in nglview)
(class in nglview.adaptor)
picked (nglview.NGLWidget attribute)
,
[1]
(nglview.widget.NGLWidget attribute)
ProdyStructure (class in nglview)
(class in nglview.adaptor)
ProdyTrajectory (class in nglview)
(class in nglview.adaptor)
Psi4Structure (class in nglview)
(class in nglview.adaptor)
PyTrajTrajectory (class in nglview)
(class in nglview.adaptor)
Q
QCelementalStructure (class in nglview)
(class in nglview.adaptor)
R
RdkitStructure (class in nglview)
(class in nglview.adaptor)
register_backend (class in nglview)
(class in nglview.adaptor)
remove_component() (nglview.NGLWidget method)
,
[1]
(nglview.widget.NGLWidget method)
render_image() (nglview.NGLWidget method)
,
[1]
(nglview.widget.NGLWidget method)
representations (nglview.NGLWidget attribute)
,
[1]
(nglview.widget.NGLWidget attribute)
reset() (in module nglview.theme.theme)
RosettaStructure (class in nglview)
(class in nglview.adaptor)
run() (in module nglview.utils.js_utils)
S
scripts (module)
set_coordinates() (nglview.NGLWidget method)
,
[1]
(nglview.widget.ComponentViewer method)
(nglview.widget.NGLWidget method)
set_representations() (nglview.NGLWidget method)
,
[1]
(nglview.widget.NGLWidget method)
Shape (class in nglview.shape)
show() (nglview.NGLWidget method)
,
[1]
(nglview.widget.ComponentViewer method)
(nglview.widget.NGLWidget method)
show_ase() (in module nglview)
show_asetraj() (in module nglview)
show_biopython() (in module nglview)
show_file() (in module nglview)
show_htmd() (in module nglview)
show_iodata() (in module nglview)
show_iotbx() (in module nglview)
show_mdanalysis() (in module nglview)
show_mdtraj() (in module nglview)
show_only() (nglview.NGLWidget method)
,
[1]
(nglview.widget.NGLWidget method)
show_openbabel() (in module nglview)
show_parmed() (in module nglview)
show_pdbid() (in module nglview)
show_prody() (in module nglview)
show_psi4() (in module nglview)
show_pymatgen() (in module nglview)
show_pytraj() (in module nglview)
show_qcelemental() (in module nglview)
show_rdkit() (in module nglview)
show_rosetta() (in module nglview)
show_schrodinger() (in module nglview)
show_simpletraj() (in module nglview)
show_structure_file() (in module nglview)
show_text() (in module nglview)
show_toolbar() (in module nglview.utils.js_utils)
show_url() (in module nglview)
SimpletrajTrajectory (class in nglview)
(class in nglview.adaptor)
sleep() (nglview.contrib.movie.MovieMaker method)
smooth() (nglview.player.TrajectoryPlayer method)
spin (nglview.player.TrajectoryPlayer attribute)
step (nglview.player.TrajectoryPlayer attribute)
sync_frame (nglview.player.TrajectoryPlayer attribute)
sync_view() (nglview.NGLWidget method)
,
[1]
(nglview.widget.NGLWidget method)
T
TextStructure (class in nglview)
(class in nglview.adaptor)
TrajectoryPlayer (class in nglview.player)
U
update_parameters (nglview.player.TrajectoryPlayer attribute)
update_representation() (nglview.NGLWidget method)
,
[1]
(nglview.widget.NGLWidget method)
update_sync_frame (nglview.player.TrajectoryPlayer attribute)
W
widget_accordion_repr_parameters (nglview.player.TrajectoryPlayer attribute)
widget_component_dropdown (nglview.player.TrajectoryPlayer attribute)
widget_component_slider (nglview.player.TrajectoryPlayer attribute)
widget_export_image (nglview.player.TrajectoryPlayer attribute)
widget_extra (nglview.player.TrajectoryPlayer attribute)
widget_general (nglview.player.TrajectoryPlayer attribute)
widget_help (nglview.player.TrajectoryPlayer attribute)
widget_picked (nglview.player.TrajectoryPlayer attribute)
widget_preference (nglview.player.TrajectoryPlayer attribute)
widget_quick_repr (nglview.player.TrajectoryPlayer attribute)
widget_repr (nglview.player.TrajectoryPlayer attribute)
widget_repr_add (nglview.player.TrajectoryPlayer attribute)
widget_repr_choices (nglview.player.TrajectoryPlayer attribute)
widget_repr_control_buttons (nglview.player.TrajectoryPlayer attribute)
widget_repr_name (nglview.player.TrajectoryPlayer attribute)
widget_repr_parameters (nglview.player.TrajectoryPlayer attribute)
widget_repr_parameters_dialog (nglview.player.TrajectoryPlayer attribute)
widget_repr_slider (nglview.player.TrajectoryPlayer attribute)
widget_tab (nglview.player.TrajectoryPlayer attribute)
write_html() (in module nglview)
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NGLView 2.1.0 documentation
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