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import PdbParser from 'ngl/src/parser/pdb-parser.js'

public class | source

PdbParser

Extends:

Parser → StructureParser → PdbParser

Direct Subclass:

Constructor Summary

Public Constructor
public	constructor(streamer: Streamer, params: Object): undefined Create a pdb parser

Member Summary

Public Members
public	hex
public get	type

Method Summary

Private Methods
private	_parse()

Inherited Summary

From class Parser
public get	isBinary
public get	isJson
public get	isXml
public get	type
private get	__objName
public	name
public	path
public	streamer
public	parse()
private	_afterParse()
private	_beforeParse()
private	_parse()

From class StructureParser
public get	type
private get	__objName
public	asTrajectory
public	cAlphaOnly
public	firstModelOnly
public	structure
public	structureBuilder

Public Constructors

public constructor(streamer: Streamer, params: Object): undefined source

Create a pdb parser

Override:

StructureParser#constructor

Params:

Name	Type	Attribute	Description
streamer	Streamer		streamer object
params	Object		params object
params.hex	Boolean		hexadecimal parsing of atom numbers >99.999 and residue numbers >9.999

Return:

Public Members

public hex source

public get type source

Override:

StructureParser#type

Private Methods

private _parse() source

Override: